J6_9RTU_001

3D structure

PDB id

9RTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G(P610L)-GDP-Pi)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

9RTU|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RTU|1|A|G|45
9RTU|1|A|G|46
*
9RTU|1|A|C|179
9RTU|1|A|G|180
9RTU|1|A|A|181
9RTU|1|A|A|182
9RTU|1|A|C|183
*
9RTU|1|A|G|214
9RTU|1|A|G|215
9RTU|1|A|A|216
9RTU|1|A|A|217
9RTU|1|A|A|218
9RTU|1|A|A|219
9RTU|1|A|G|220
9RTU|1|A|A|221
9RTU|1|A|A|222
9RTU|1|A|A|223
9RTU|1|A|U|224
*
9RTU|1|A|A|231
9RTU|1|A|G|232
9RTU|1|A|A|233
9RTU|1|A|U|234
9RTU|1|A|U|235
*
9RTU|1|A|A|262
9RTU|1|A|G|263
9RTU|1|A|C|264
9RTU|1|A|A|265
9RTU|1|A|G|266
*
9RTU|1|A|C|426
9RTU|1|A|U|427
9RTU|1|A|A|428
9RTU|1|A|A|429
9RTU|1|A|A|430
9RTU|1|A|U|431
9RTU|1|A|A|432
9RTU|1|A|C|433

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

Large ribosomal subunit protein bL34