J6_9S7B_001
3D structure
- PDB id
- 9S7B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in intermediate state (AP*)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AGAUAG*CAA*UUAG*CACUA*UUGUAG*CACACCCAAU
- Length
- 34 nucleotides
- Bulged bases
- 9S7B|1|A|U|2030, 9S7B|1|A|A|2097, 9S7B|1|A|C|2262
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9S7B|1|A|A|2027
9S7B|1|A|G|2028
9S7B|1|A|A|2029
9S7B|1|A|U|2030
9S7B|1|A|A|2031
9S7B|1|A|G|2032
*
9S7B|1|A|C|2043
9S7B|1|A|A|2044
9S7B|1|A|A|2045
*
9S7B|1|A|U|2095
9S7B|1|A|U|2096
9S7B|1|A|A|2097
9S7B|1|A|G|2098
*
9S7B|1|A|C|2123
9S7B|1|A|A|2124
9S7B|1|A|C|2125
9S7B|1|A|U|2126
9S7B|1|A|A|2127
*
9S7B|1|A|U|2138
9S7B|1|A|U|2139
9S7B|1|A|G|2140
9S7B|1|A|U|2141
9S7B|1|A|A|2142
9S7B|1|A|G|2143
*
9S7B|1|A|C|2257
9S7B|1|A|A|2258
9S7B|1|A|C|2259
9S7B|1|A|A|2260
9S7B|1|A|C|2261
9S7B|1|A|C|2262
9S7B|1|A|C|2263
9S7B|1|A|A|2264
9S7B|1|A|A|2265
9S7B|1|A|U|2266
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 3
- Large ribosomal subunit protein bL35m
- Chain I
- Large ribosomal subunit protein uL10m
- Chain M
- Large ribosomal subunit protein uL15m
- Chain N
- Large ribosomal subunit protein uL16m
- Chain R
- Large ribosomal subunit protein bL20m
- Chain S
- Large ribosomal subunit protein bL21m
- Chain W
- Large ribosomal subunit protein bL27m
- Chain Z
- Large ribosomal subunit protein uL30m
- Chain i
- Large ribosomal subunit protein mL51
- Chain j
- Large ribosomal subunit protein mL52
- Chain o
- Large ribosomal subunit protein mL63
Coloring options: