J6_9T5X_001

3D structure

PDB id

9T5X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a stalled E. coli 70S RNC-NuoK-70 in complex with the membrane protein insertase SecYEG-YidC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

9T5X|1|a|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9T5X|1|a|G|45
9T5X|1|a|G|46
*
9T5X|1|a|C|179
9T5X|1|a|G|180
9T5X|1|a|A|181
9T5X|1|a|A|182
9T5X|1|a|C|183
*
9T5X|1|a|G|214
9T5X|1|a|G|215
9T5X|1|a|A|216
9T5X|1|a|A|217
9T5X|1|a|A|218
9T5X|1|a|A|219
9T5X|1|a|G|220
9T5X|1|a|A|221
9T5X|1|a|A|222
9T5X|1|a|A|223
9T5X|1|a|U|224
*
9T5X|1|a|A|231
9T5X|1|a|G|232
9T5X|1|a|A|233
9T5X|1|a|U|234
9T5X|1|a|U|235
*
9T5X|1|a|A|262
9T5X|1|a|G|263
9T5X|1|a|C|264
9T5X|1|a|A|265
9T5X|1|a|G|266
*
9T5X|1|a|C|426
9T5X|1|a|U|427
9T5X|1|a|A|428
9T5X|1|a|A|429
9T5X|1|a|A|430
9T5X|1|a|U|431
9T5X|1|a|A|432
9T5X|1|a|C|433

Current chains

Chain a

23S rRNA

Nearby chains

Chain 1

Large ribosomal subunit protein bL34