J6_9TEW_001

3D structure

PDB id

9TEW (explore in PDB, NAKB, or RNA 3D Hub)

Description

DalDro bound to the initiating Escherichia coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

9TEW|1|a|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TEW|1|a|G|45
9TEW|1|a|G|46
*
9TEW|1|a|C|179
9TEW|1|a|G|180
9TEW|1|a|A|181
9TEW|1|a|A|182
9TEW|1|a|C|183
*
9TEW|1|a|G|214
9TEW|1|a|G|215
9TEW|1|a|A|216
9TEW|1|a|A|217
9TEW|1|a|A|218
9TEW|1|a|A|219
9TEW|1|a|G|220
9TEW|1|a|A|221
9TEW|1|a|A|222
9TEW|1|a|A|223
9TEW|1|a|U|224
*
9TEW|1|a|A|231
9TEW|1|a|G|232
9TEW|1|a|A|233
9TEW|1|a|U|234
9TEW|1|a|U|235
*
9TEW|1|a|A|262
9TEW|1|a|G|263
9TEW|1|a|C|264
9TEW|1|a|A|265
9TEW|1|a|G|266
*
9TEW|1|a|C|426
9TEW|1|a|U|427
9TEW|1|a|A|428
9TEW|1|a|A|429
9TEW|1|a|A|430
9TEW|1|a|U|431
9TEW|1|a|A|432
9TEW|1|a|C|433

Current chains

Chain a

23S rRNA

Nearby chains

Chain 1

Large ribosomal subunit protein bL34