J6_9TZ9_002
3D structure
- PDB id
- 9TZ9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Empty 50S Subunit of the Coxiella burnetii Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.19 Å
Loop
- Sequence
- UUUA*UUUG*CU*AGUA*UCUUAGUGAUCC*GCUCAACGGAUAAAA
- Length
- 41 nucleotides
- Bulged bases
- 9TZ9|1|a|U|2092, 9TZ9|1|a|A|2404, 9TZ9|1|a|G|2444, 9TZ9|1|a|A|2446, 9TZ9|1|a|U|2447
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9TZ9|1|a|U|2090
9TZ9|1|a|U|2091
9TZ9|1|a|U|2092
9TZ9|1|a|A|2093
*
9TZ9|1|a|U|2259
9TZ9|1|a|U|2260
9TZ9|1|a|U|2261
9TZ9|1|a|G|2262
*
9TZ9|1|a|C|2274
9TZ9|1|a|U|2275
*
9TZ9|1|a|A|2297
9TZ9|1|a|G|2298
9TZ9|1|a|U|2299
9TZ9|1|a|A|2300
*
9TZ9|1|a|U|2400
9TZ9|1|a|C|2401
9TZ9|1|a|U|2402
9TZ9|1|a|U|2403
9TZ9|1|a|A|2404
9TZ9|1|a|G|2405
9TZ9|1|a|U|2406
9TZ9|1|a|G|2407
9TZ9|1|a|A|2408
9TZ9|1|a|U|2409
9TZ9|1|a|C|2410
9TZ9|1|a|C|2411
*
9TZ9|1|a|G|2437
9TZ9|1|a|C|2438
9TZ9|1|a|U|2439
9TZ9|1|a|C|2440
9TZ9|1|a|A|2441
9TZ9|1|a|A|2442
9TZ9|1|a|C|2443
9TZ9|1|a|G|2444
9TZ9|1|a|G|2445
9TZ9|1|a|A|2446
9TZ9|1|a|U|2447
9TZ9|1|a|A|2448
9TZ9|1|a|A|2449
9TZ9|1|a|A|2450
9TZ9|1|a|A|2451
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain 0
- Large ribosomal subunit protein bL33
- Chain 8
- Large ribosomal subunit protein bL27
- Chain 9
- Large ribosomal subunit protein bL28
- Chain k
- Large ribosomal subunit protein uL15
- Chain o
- Large ribosomal subunit protein uL2
- Chain z
- Large ribosomal subunit protein bL35
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