J6_9WNR_001
3D structure
- PDB id
- 9WNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC
- Length
- 36 nucleotides
- Bulged bases
- 9WNR|1|b|A|223, 9WNR|1|b|A|265
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9WNR|1|b|G|45
9WNR|1|b|G|46
*
9WNR|1|b|C|179
9WNR|1|b|G|180
9WNR|1|b|A|181
9WNR|1|b|A|182
9WNR|1|b|C|183
*
9WNR|1|b|G|214
9WNR|1|b|G|215
9WNR|1|b|A|216
9WNR|1|b|A|217
9WNR|1|b|A|218
9WNR|1|b|A|219
9WNR|1|b|G|220
9WNR|1|b|A|221
9WNR|1|b|A|222
9WNR|1|b|A|223
9WNR|1|b|U|224
*
9WNR|1|b|A|231
9WNR|1|b|G|232
9WNR|1|b|A|233
9WNR|1|b|U|234
9WNR|1|b|U|235
*
9WNR|1|b|A|262
9WNR|1|b|G|263
9WNR|1|b|C|264
9WNR|1|b|A|265
9WNR|1|b|G|266
*
9WNR|1|b|C|426
9WNR|1|b|U|427
9WNR|1|b|A|428
9WNR|1|b|A|429
9WNR|1|b|A|430
9WNR|1|b|U|431
9WNR|1|b|A|432
9WNR|1|b|C|433
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain 6
- 50S ribosomal protein L34
Coloring options: