J6_9WW4_001
3D structure
- PDB id
- 9WW4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome non-rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.48 Å
Loop
- Sequence
- GGCGAC*GGAGAAGAAAC*GGAUU*AAGAG*CUAAAUAC*GUC
- Length
- 38 nucleotides
- Bulged bases
- 9WW4|1|AA|A|66, 9WW4|1|AC|U|34
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9WW4|1|AA|G|21
9WW4|1|AA|G|22
9WW4|1|AA|C|23
9WW4|1|AA|G|24
9WW4|1|AA|A|25
9WW4|1|AA|C|26
*
9WW4|1|AA|G|57
9WW4|1|AA|G|58
9WW4|1|AA|A|59
9WW4|1|AA|G|60
9WW4|1|AA|A|61
9WW4|1|AA|A|62
9WW4|1|AA|G|63
9WW4|1|AA|A|64
9WW4|1|AA|A|65
9WW4|1|AA|A|66
9WW4|1|AA|C|67
*
9WW4|1|AA|G|74
9WW4|1|AA|G|75
9WW4|1|AA|A|76
9WW4|1|AA|U|77
9WW4|1|AA|U|78
*
9WW4|1|AA|A|105
9WW4|1|AA|A|106
9WW4|1|AA|G|107
9WW4|1|AA|A|108
9WW4|1|AA|G|109
*
9WW4|1|AA|C|332
9WW4|1|AA|U|333
9WW4|1|AA|A|334
9WW4|1|AA|A|335
9WW4|1|AA|A|336
9WW4|1|AA|U|337
9WW4|1|AA|A|338
9WW4|1|AA|C|339
*
9WW4|1|AC|G|33
9WW4|1|AC|U|34
9WW4|1|AC|C|35
Current chains
- Chain AA
- 28S rRNA (3773-MER)
- Chain AC
- 5.8S rRNA (156-MER)
Nearby chains
- Chain AN
- 60S ribosomal protein L13
- Chain AP
- 60S ribosomal protein L15
- Chain Aj
- 60S ribosomal protein L35
- Chain Ak
- 60S ribosomal protein L36
- Chain Al
- 60S ribosomal protein L37
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