J6_9XFL_001

3D structure

PDB id

9XFL (explore in PDB, NAKB, or RNA 3D Hub)

Description

In vitro structure of bacterial 50S ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3.16 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

9XFL|1|I|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9XFL|1|I|G|45
9XFL|1|I|G|46
*
9XFL|1|I|C|179
9XFL|1|I|G|180
9XFL|1|I|A|181
9XFL|1|I|A|182
9XFL|1|I|C|183
*
9XFL|1|I|G|214
9XFL|1|I|G|215
9XFL|1|I|A|216
9XFL|1|I|A|217
9XFL|1|I|A|218
9XFL|1|I|A|219
9XFL|1|I|G|220
9XFL|1|I|A|221
9XFL|1|I|A|222
9XFL|1|I|A|223
9XFL|1|I|U|224
*
9XFL|1|I|A|231
9XFL|1|I|G|232
9XFL|1|I|A|233
9XFL|1|I|U|234
9XFL|1|I|U|235
*
9XFL|1|I|A|262
9XFL|1|I|G|263
9XFL|1|I|C|264
9XFL|1|I|A|265
9XFL|1|I|G|266
*
9XFL|1|I|C|426
9XFL|1|I|U|427
9XFL|1|I|A|428
9XFL|1|I|A|429
9XFL|1|I|A|430
9XFL|1|I|U|431
9XFL|1|I|A|432
9XFL|1|I|C|433

Current chains

Chain I

23S rRNA

Nearby chains

Chain k

50S ribosomal protein L34