J6_9ZF2_001

3D structure

PDB id

9ZF2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GAC*GUAGAUAGAUG

Length

42 nucleotides

Bulged bases

9ZF2|1|A|U|52, 9ZF2|1|A|A|256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZF2|1|A|C|21
9ZF2|1|A|G|22
9ZF2|1|A|C|23
*
9ZF2|1|A|G|44
9ZF2|1|A|A|45
9ZF2|1|A|G|46
9ZF2|1|A|G|47
9ZF2|1|A|A|48
9ZF2|1|A|A|49
9ZF2|1|A|A|50
9ZF2|1|A|G|51
9ZF2|1|A|U|52
9ZF2|1|A|C|53
9ZF2|1|A|C|54
9ZF2|1|A|A|55
9ZF2|1|A|U|56
9ZF2|1|A|G|57
9ZF2|1|A|C|58
*
9ZF2|1|A|G|254
9ZF2|1|A|A|255
9ZF2|1|A|A|256
9ZF2|1|A|A|257
9ZF2|1|A|C|258
*
9ZF2|1|A|G|274
9ZF2|1|A|G|275
9ZF2|1|A|C|276
9ZF2|1|A|A|277
9ZF2|1|A|C|278
*
9ZF2|1|A|G|307
9ZF2|1|A|A|308
9ZF2|1|A|C|309
*
9ZF2|1|A|G|328
9ZF2|1|A|U|329
9ZF2|1|A|A|330
9ZF2|1|A|G|331
9ZF2|1|A|A|332
9ZF2|1|A|U|333
9ZF2|1|A|A|334
9ZF2|1|A|G|335
9ZF2|1|A|A|336
9ZF2|1|A|U|337
9ZF2|1|A|G|338

Current chains

Chain A

RNase P RNA

Nearby chains