J6_9ZF5_001

3D structure

PDB id

9ZF5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 49

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GAC*GUAGAUAGAUG

Length

42 nucleotides

Bulged bases

9ZF5|1|A|U|52, 9ZF5|1|A|A|256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZF5|1|A|C|21
9ZF5|1|A|G|22
9ZF5|1|A|C|23
*
9ZF5|1|A|G|44
9ZF5|1|A|A|45
9ZF5|1|A|G|46
9ZF5|1|A|G|47
9ZF5|1|A|A|48
9ZF5|1|A|A|49
9ZF5|1|A|A|50
9ZF5|1|A|G|51
9ZF5|1|A|U|52
9ZF5|1|A|C|53
9ZF5|1|A|C|54
9ZF5|1|A|A|55
9ZF5|1|A|U|56
9ZF5|1|A|G|57
9ZF5|1|A|C|58
*
9ZF5|1|A|G|254
9ZF5|1|A|A|255
9ZF5|1|A|A|256
9ZF5|1|A|A|257
9ZF5|1|A|C|258
*
9ZF5|1|A|G|274
9ZF5|1|A|G|275
9ZF5|1|A|C|276
9ZF5|1|A|A|277
9ZF5|1|A|C|278
*
9ZF5|1|A|G|307
9ZF5|1|A|A|308
9ZF5|1|A|C|309
*
9ZF5|1|A|G|328
9ZF5|1|A|U|329
9ZF5|1|A|A|330
9ZF5|1|A|G|331
9ZF5|1|A|A|332
9ZF5|1|A|U|333
9ZF5|1|A|A|334
9ZF5|1|A|G|335
9ZF5|1|A|A|336
9ZF5|1|A|U|337
9ZF5|1|A|G|338

Current chains

Chain A

RNase P RNA

Nearby chains