J6_9ZFC_001

3D structure

PDB id

9ZFC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GAC*GUAGAUAGAUG

Length

42 nucleotides

Bulged bases

9ZFC|1|A|U|52, 9ZFC|1|A|A|256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZFC|1|A|C|21
9ZFC|1|A|G|22
9ZFC|1|A|C|23
*
9ZFC|1|A|G|44
9ZFC|1|A|A|45
9ZFC|1|A|G|46
9ZFC|1|A|G|47
9ZFC|1|A|A|48
9ZFC|1|A|A|49
9ZFC|1|A|A|50
9ZFC|1|A|G|51
9ZFC|1|A|U|52
9ZFC|1|A|C|53
9ZFC|1|A|C|54
9ZFC|1|A|A|55
9ZFC|1|A|U|56
9ZFC|1|A|G|57
9ZFC|1|A|C|58
*
9ZFC|1|A|G|254
9ZFC|1|A|A|255
9ZFC|1|A|A|256
9ZFC|1|A|A|257
9ZFC|1|A|C|258
*
9ZFC|1|A|G|274
9ZFC|1|A|G|275
9ZFC|1|A|C|276
9ZFC|1|A|A|277
9ZFC|1|A|C|278
*
9ZFC|1|A|G|307
9ZFC|1|A|A|308
9ZFC|1|A|C|309
*
9ZFC|1|A|G|328
9ZFC|1|A|U|329
9ZFC|1|A|A|330
9ZFC|1|A|G|331
9ZFC|1|A|A|332
9ZFC|1|A|U|333
9ZFC|1|A|A|334
9ZFC|1|A|G|335
9ZFC|1|A|A|336
9ZFC|1|A|U|337
9ZFC|1|A|G|338

Current chains

Chain A

RNase P RNA

Nearby chains