J6_9ZGN_001

3D structure

PDB id

9ZGN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 5

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GAC*GUAGAUAGAUG

Length

42 nucleotides

Bulged bases

9ZGN|1|A|U|52, 9ZGN|1|A|A|256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZGN|1|A|C|21
9ZGN|1|A|G|22
9ZGN|1|A|C|23
*
9ZGN|1|A|G|44
9ZGN|1|A|A|45
9ZGN|1|A|G|46
9ZGN|1|A|G|47
9ZGN|1|A|A|48
9ZGN|1|A|A|49
9ZGN|1|A|A|50
9ZGN|1|A|G|51
9ZGN|1|A|U|52
9ZGN|1|A|C|53
9ZGN|1|A|C|54
9ZGN|1|A|A|55
9ZGN|1|A|U|56
9ZGN|1|A|G|57
9ZGN|1|A|C|58
*
9ZGN|1|A|G|254
9ZGN|1|A|A|255
9ZGN|1|A|A|256
9ZGN|1|A|A|257
9ZGN|1|A|C|258
*
9ZGN|1|A|G|274
9ZGN|1|A|G|275
9ZGN|1|A|C|276
9ZGN|1|A|A|277
9ZGN|1|A|C|278
*
9ZGN|1|A|G|307
9ZGN|1|A|A|308
9ZGN|1|A|C|309
*
9ZGN|1|A|G|328
9ZGN|1|A|U|329
9ZGN|1|A|A|330
9ZGN|1|A|G|331
9ZGN|1|A|A|332
9ZGN|1|A|U|333
9ZGN|1|A|A|334
9ZGN|1|A|G|335
9ZGN|1|A|A|336
9ZGN|1|A|U|337
9ZGN|1|A|G|338

Current chains

Chain A

RNase P RNA

Nearby chains