J6_9ZGO_001

3D structure

PDB id

9ZGO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 6

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GAC*GUAGAUAGAUG

Length

42 nucleotides

Bulged bases

9ZGO|1|A|U|52, 9ZGO|1|A|A|256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZGO|1|A|C|21
9ZGO|1|A|G|22
9ZGO|1|A|C|23
*
9ZGO|1|A|G|44
9ZGO|1|A|A|45
9ZGO|1|A|G|46
9ZGO|1|A|G|47
9ZGO|1|A|A|48
9ZGO|1|A|A|49
9ZGO|1|A|A|50
9ZGO|1|A|G|51
9ZGO|1|A|U|52
9ZGO|1|A|C|53
9ZGO|1|A|C|54
9ZGO|1|A|A|55
9ZGO|1|A|U|56
9ZGO|1|A|G|57
9ZGO|1|A|C|58
*
9ZGO|1|A|G|254
9ZGO|1|A|A|255
9ZGO|1|A|A|256
9ZGO|1|A|A|257
9ZGO|1|A|C|258
*
9ZGO|1|A|G|274
9ZGO|1|A|G|275
9ZGO|1|A|C|276
9ZGO|1|A|A|277
9ZGO|1|A|C|278
*
9ZGO|1|A|G|307
9ZGO|1|A|A|308
9ZGO|1|A|C|309
*
9ZGO|1|A|G|328
9ZGO|1|A|U|329
9ZGO|1|A|A|330
9ZGO|1|A|G|331
9ZGO|1|A|A|332
9ZGO|1|A|U|333
9ZGO|1|A|A|334
9ZGO|1|A|G|335
9ZGO|1|A|A|336
9ZGO|1|A|U|337
9ZGO|1|A|G|338

Current chains

Chain A

RNase P RNA

Nearby chains