J6_9ZGP_001

3D structure

PDB id

9ZGP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 7

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GAC*GUAGAUAGAUG

Length

42 nucleotides

Bulged bases

9ZGP|1|A|U|52, 9ZGP|1|A|A|256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZGP|1|A|C|21
9ZGP|1|A|G|22
9ZGP|1|A|C|23
*
9ZGP|1|A|G|44
9ZGP|1|A|A|45
9ZGP|1|A|G|46
9ZGP|1|A|G|47
9ZGP|1|A|A|48
9ZGP|1|A|A|49
9ZGP|1|A|A|50
9ZGP|1|A|G|51
9ZGP|1|A|U|52
9ZGP|1|A|C|53
9ZGP|1|A|C|54
9ZGP|1|A|A|55
9ZGP|1|A|U|56
9ZGP|1|A|G|57
9ZGP|1|A|C|58
*
9ZGP|1|A|G|254
9ZGP|1|A|A|255
9ZGP|1|A|A|256
9ZGP|1|A|A|257
9ZGP|1|A|C|258
*
9ZGP|1|A|G|274
9ZGP|1|A|G|275
9ZGP|1|A|C|276
9ZGP|1|A|A|277
9ZGP|1|A|C|278
*
9ZGP|1|A|G|307
9ZGP|1|A|A|308
9ZGP|1|A|C|309
*
9ZGP|1|A|G|328
9ZGP|1|A|U|329
9ZGP|1|A|A|330
9ZGP|1|A|G|331
9ZGP|1|A|A|332
9ZGP|1|A|U|333
9ZGP|1|A|A|334
9ZGP|1|A|G|335
9ZGP|1|A|A|336
9ZGP|1|A|U|337
9ZGP|1|A|G|338

Current chains

Chain A

RNase P RNA

Nearby chains