J6_9ZGQ_001

3D structure

PDB id

9ZGQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 8

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GAC*GUAGAUAGAUG

Length

42 nucleotides

Bulged bases

9ZGQ|1|A|U|52, 9ZGQ|1|A|A|256, 9ZGQ|1|A|A|334

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZGQ|1|A|C|21
9ZGQ|1|A|G|22
9ZGQ|1|A|C|23
*
9ZGQ|1|A|G|44
9ZGQ|1|A|A|45
9ZGQ|1|A|G|46
9ZGQ|1|A|G|47
9ZGQ|1|A|A|48
9ZGQ|1|A|A|49
9ZGQ|1|A|A|50
9ZGQ|1|A|G|51
9ZGQ|1|A|U|52
9ZGQ|1|A|C|53
9ZGQ|1|A|C|54
9ZGQ|1|A|A|55
9ZGQ|1|A|U|56
9ZGQ|1|A|G|57
9ZGQ|1|A|C|58
*
9ZGQ|1|A|G|254
9ZGQ|1|A|A|255
9ZGQ|1|A|A|256
9ZGQ|1|A|A|257
9ZGQ|1|A|C|258
*
9ZGQ|1|A|G|274
9ZGQ|1|A|G|275
9ZGQ|1|A|C|276
9ZGQ|1|A|A|277
9ZGQ|1|A|C|278
*
9ZGQ|1|A|G|307
9ZGQ|1|A|A|308
9ZGQ|1|A|C|309
*
9ZGQ|1|A|G|328
9ZGQ|1|A|U|329
9ZGQ|1|A|A|330
9ZGQ|1|A|G|331
9ZGQ|1|A|A|332
9ZGQ|1|A|U|333
9ZGQ|1|A|A|334
9ZGQ|1|A|G|335
9ZGQ|1|A|A|336
9ZGQ|1|A|U|337
9ZGQ|1|A|G|338

Current chains

Chain A

RNase P RNA

Nearby chains