J6_9ZGR_001

3D structure

PDB id

9ZGR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 9

Experimental method

ELECTRON MICROSCOPY

Resolution

2.93 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GAC*GUAGAUAGAUG

Length

42 nucleotides

Bulged bases

9ZGR|1|A|U|52, 9ZGR|1|A|A|256, 9ZGR|1|A|A|334

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZGR|1|A|C|21
9ZGR|1|A|G|22
9ZGR|1|A|C|23
*
9ZGR|1|A|G|44
9ZGR|1|A|A|45
9ZGR|1|A|G|46
9ZGR|1|A|G|47
9ZGR|1|A|A|48
9ZGR|1|A|A|49
9ZGR|1|A|A|50
9ZGR|1|A|G|51
9ZGR|1|A|U|52
9ZGR|1|A|C|53
9ZGR|1|A|C|54
9ZGR|1|A|A|55
9ZGR|1|A|U|56
9ZGR|1|A|G|57
9ZGR|1|A|C|58
*
9ZGR|1|A|G|254
9ZGR|1|A|A|255
9ZGR|1|A|A|256
9ZGR|1|A|A|257
9ZGR|1|A|C|258
*
9ZGR|1|A|G|274
9ZGR|1|A|G|275
9ZGR|1|A|C|276
9ZGR|1|A|A|277
9ZGR|1|A|C|278
*
9ZGR|1|A|G|307
9ZGR|1|A|A|308
9ZGR|1|A|C|309
*
9ZGR|1|A|G|328
9ZGR|1|A|U|329
9ZGR|1|A|A|330
9ZGR|1|A|G|331
9ZGR|1|A|A|332
9ZGR|1|A|U|333
9ZGR|1|A|A|334
9ZGR|1|A|G|335
9ZGR|1|A|A|336
9ZGR|1|A|U|337
9ZGR|1|A|G|338

Current chains

Chain A

RNase P RNA

Nearby chains