J6_9ZGS_001

3D structure

PDB id

9ZGS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 10

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GAC*GUAGAUAGAUG

Length

42 nucleotides

Bulged bases

9ZGS|1|A|U|52, 9ZGS|1|A|A|256, 9ZGS|1|A|A|334

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZGS|1|A|C|21
9ZGS|1|A|G|22
9ZGS|1|A|C|23
*
9ZGS|1|A|G|44
9ZGS|1|A|A|45
9ZGS|1|A|G|46
9ZGS|1|A|G|47
9ZGS|1|A|A|48
9ZGS|1|A|A|49
9ZGS|1|A|A|50
9ZGS|1|A|G|51
9ZGS|1|A|U|52
9ZGS|1|A|C|53
9ZGS|1|A|C|54
9ZGS|1|A|A|55
9ZGS|1|A|U|56
9ZGS|1|A|G|57
9ZGS|1|A|C|58
*
9ZGS|1|A|G|254
9ZGS|1|A|A|255
9ZGS|1|A|A|256
9ZGS|1|A|A|257
9ZGS|1|A|C|258
*
9ZGS|1|A|G|274
9ZGS|1|A|G|275
9ZGS|1|A|C|276
9ZGS|1|A|A|277
9ZGS|1|A|C|278
*
9ZGS|1|A|G|307
9ZGS|1|A|A|308
9ZGS|1|A|C|309
*
9ZGS|1|A|G|328
9ZGS|1|A|U|329
9ZGS|1|A|A|330
9ZGS|1|A|G|331
9ZGS|1|A|A|332
9ZGS|1|A|U|333
9ZGS|1|A|A|334
9ZGS|1|A|G|335
9ZGS|1|A|A|336
9ZGS|1|A|U|337
9ZGS|1|A|G|338

Current chains

Chain A

RNase P RNA

Nearby chains