J6_9ZGX_001

3D structure

PDB id

9ZGX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 15

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GAC*GUAGAUAGAUG

Length

42 nucleotides

Bulged bases

9ZGX|1|A|U|52, 9ZGX|1|A|A|256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZGX|1|A|C|21
9ZGX|1|A|G|22
9ZGX|1|A|C|23
*
9ZGX|1|A|G|44
9ZGX|1|A|A|45
9ZGX|1|A|G|46
9ZGX|1|A|G|47
9ZGX|1|A|A|48
9ZGX|1|A|A|49
9ZGX|1|A|A|50
9ZGX|1|A|G|51
9ZGX|1|A|U|52
9ZGX|1|A|C|53
9ZGX|1|A|C|54
9ZGX|1|A|A|55
9ZGX|1|A|U|56
9ZGX|1|A|G|57
9ZGX|1|A|C|58
*
9ZGX|1|A|G|254
9ZGX|1|A|A|255
9ZGX|1|A|A|256
9ZGX|1|A|A|257
9ZGX|1|A|C|258
*
9ZGX|1|A|G|274
9ZGX|1|A|G|275
9ZGX|1|A|C|276
9ZGX|1|A|A|277
9ZGX|1|A|C|278
*
9ZGX|1|A|G|307
9ZGX|1|A|A|308
9ZGX|1|A|C|309
*
9ZGX|1|A|G|328
9ZGX|1|A|U|329
9ZGX|1|A|A|330
9ZGX|1|A|G|331
9ZGX|1|A|A|332
9ZGX|1|A|U|333
9ZGX|1|A|A|334
9ZGX|1|A|G|335
9ZGX|1|A|A|336
9ZGX|1|A|U|337
9ZGX|1|A|G|338

Current chains

Chain A

RNase P RNA

Nearby chains