J6_9ZGY_001

3D structure

PDB id

9ZGY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 16

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GAC*GUAGAUAGAUG

Length

42 nucleotides

Bulged bases

9ZGY|1|A|U|52, 9ZGY|1|A|A|256, 9ZGY|1|A|A|334

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZGY|1|A|C|21
9ZGY|1|A|G|22
9ZGY|1|A|C|23
*
9ZGY|1|A|G|44
9ZGY|1|A|A|45
9ZGY|1|A|G|46
9ZGY|1|A|G|47
9ZGY|1|A|A|48
9ZGY|1|A|A|49
9ZGY|1|A|A|50
9ZGY|1|A|G|51
9ZGY|1|A|U|52
9ZGY|1|A|C|53
9ZGY|1|A|C|54
9ZGY|1|A|A|55
9ZGY|1|A|U|56
9ZGY|1|A|G|57
9ZGY|1|A|C|58
*
9ZGY|1|A|G|254
9ZGY|1|A|A|255
9ZGY|1|A|A|256
9ZGY|1|A|A|257
9ZGY|1|A|C|258
*
9ZGY|1|A|G|274
9ZGY|1|A|G|275
9ZGY|1|A|C|276
9ZGY|1|A|A|277
9ZGY|1|A|C|278
*
9ZGY|1|A|G|307
9ZGY|1|A|A|308
9ZGY|1|A|C|309
*
9ZGY|1|A|G|328
9ZGY|1|A|U|329
9ZGY|1|A|A|330
9ZGY|1|A|G|331
9ZGY|1|A|A|332
9ZGY|1|A|U|333
9ZGY|1|A|A|334
9ZGY|1|A|G|335
9ZGY|1|A|A|336
9ZGY|1|A|U|337
9ZGY|1|A|G|338

Current chains

Chain A

RNase P RNA

Nearby chains