J6_9ZGZ_001

3D structure

PDB id

9ZGZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 17

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GAC*GUAGAUAGAUG

Length

42 nucleotides

Bulged bases

9ZGZ|1|A|U|52, 9ZGZ|1|A|A|256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZGZ|1|A|C|21
9ZGZ|1|A|G|22
9ZGZ|1|A|C|23
*
9ZGZ|1|A|G|44
9ZGZ|1|A|A|45
9ZGZ|1|A|G|46
9ZGZ|1|A|G|47
9ZGZ|1|A|A|48
9ZGZ|1|A|A|49
9ZGZ|1|A|A|50
9ZGZ|1|A|G|51
9ZGZ|1|A|U|52
9ZGZ|1|A|C|53
9ZGZ|1|A|C|54
9ZGZ|1|A|A|55
9ZGZ|1|A|U|56
9ZGZ|1|A|G|57
9ZGZ|1|A|C|58
*
9ZGZ|1|A|G|254
9ZGZ|1|A|A|255
9ZGZ|1|A|A|256
9ZGZ|1|A|A|257
9ZGZ|1|A|C|258
*
9ZGZ|1|A|G|274
9ZGZ|1|A|G|275
9ZGZ|1|A|C|276
9ZGZ|1|A|A|277
9ZGZ|1|A|C|278
*
9ZGZ|1|A|G|307
9ZGZ|1|A|A|308
9ZGZ|1|A|C|309
*
9ZGZ|1|A|G|328
9ZGZ|1|A|U|329
9ZGZ|1|A|A|330
9ZGZ|1|A|G|331
9ZGZ|1|A|A|332
9ZGZ|1|A|U|333
9ZGZ|1|A|A|334
9ZGZ|1|A|G|335
9ZGZ|1|A|A|336
9ZGZ|1|A|U|337
9ZGZ|1|A|G|338

Current chains

Chain A

RNase P RNA

Nearby chains