J6_9ZH7_001

3D structure

PDB id

9ZH7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 22

Experimental method

ELECTRON MICROSCOPY

Resolution

2.89 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GAC*GUAGAUAGAUG

Length

42 nucleotides

Bulged bases

9ZH7|1|A|U|52, 9ZH7|1|A|A|256, 9ZH7|1|A|A|334

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZH7|1|A|C|21
9ZH7|1|A|G|22
9ZH7|1|A|C|23
*
9ZH7|1|A|G|44
9ZH7|1|A|A|45
9ZH7|1|A|G|46
9ZH7|1|A|G|47
9ZH7|1|A|A|48
9ZH7|1|A|A|49
9ZH7|1|A|A|50
9ZH7|1|A|G|51
9ZH7|1|A|U|52
9ZH7|1|A|C|53
9ZH7|1|A|C|54
9ZH7|1|A|A|55
9ZH7|1|A|U|56
9ZH7|1|A|G|57
9ZH7|1|A|C|58
*
9ZH7|1|A|G|254
9ZH7|1|A|A|255
9ZH7|1|A|A|256
9ZH7|1|A|A|257
9ZH7|1|A|C|258
*
9ZH7|1|A|G|274
9ZH7|1|A|G|275
9ZH7|1|A|C|276
9ZH7|1|A|A|277
9ZH7|1|A|C|278
*
9ZH7|1|A|G|307
9ZH7|1|A|A|308
9ZH7|1|A|C|309
*
9ZH7|1|A|G|328
9ZH7|1|A|U|329
9ZH7|1|A|A|330
9ZH7|1|A|G|331
9ZH7|1|A|A|332
9ZH7|1|A|U|333
9ZH7|1|A|A|334
9ZH7|1|A|G|335
9ZH7|1|A|A|336
9ZH7|1|A|U|337
9ZH7|1|A|G|338

Current chains

Chain A

RNase P RNA

Nearby chains