J6_9ZHB_001

3D structure

PDB id

9ZHB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 25

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GAC*GUAGAUAGAUG

Length

42 nucleotides

Bulged bases

9ZHB|1|A|U|52, 9ZHB|1|A|A|256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZHB|1|A|C|21
9ZHB|1|A|G|22
9ZHB|1|A|C|23
*
9ZHB|1|A|G|44
9ZHB|1|A|A|45
9ZHB|1|A|G|46
9ZHB|1|A|G|47
9ZHB|1|A|A|48
9ZHB|1|A|A|49
9ZHB|1|A|A|50
9ZHB|1|A|G|51
9ZHB|1|A|U|52
9ZHB|1|A|C|53
9ZHB|1|A|C|54
9ZHB|1|A|A|55
9ZHB|1|A|U|56
9ZHB|1|A|G|57
9ZHB|1|A|C|58
*
9ZHB|1|A|G|254
9ZHB|1|A|A|255
9ZHB|1|A|A|256
9ZHB|1|A|A|257
9ZHB|1|A|C|258
*
9ZHB|1|A|G|274
9ZHB|1|A|G|275
9ZHB|1|A|C|276
9ZHB|1|A|A|277
9ZHB|1|A|C|278
*
9ZHB|1|A|G|307
9ZHB|1|A|A|308
9ZHB|1|A|C|309
*
9ZHB|1|A|G|328
9ZHB|1|A|U|329
9ZHB|1|A|A|330
9ZHB|1|A|G|331
9ZHB|1|A|A|332
9ZHB|1|A|U|333
9ZHB|1|A|A|334
9ZHB|1|A|G|335
9ZHB|1|A|A|336
9ZHB|1|A|U|337
9ZHB|1|A|G|338

Current chains

Chain A

RNase P RNA

Nearby chains