J6_9ZHC_001

3D structure

PDB id

9ZHC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 26

Experimental method

ELECTRON MICROSCOPY

Resolution

2.93 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GAC*GUAGAUAGAUG

Length

42 nucleotides

Bulged bases

9ZHC|1|A|U|52, 9ZHC|1|A|A|256, 9ZHC|1|A|A|334

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZHC|1|A|C|21
9ZHC|1|A|G|22
9ZHC|1|A|C|23
*
9ZHC|1|A|G|44
9ZHC|1|A|A|45
9ZHC|1|A|G|46
9ZHC|1|A|G|47
9ZHC|1|A|A|48
9ZHC|1|A|A|49
9ZHC|1|A|A|50
9ZHC|1|A|G|51
9ZHC|1|A|U|52
9ZHC|1|A|C|53
9ZHC|1|A|C|54
9ZHC|1|A|A|55
9ZHC|1|A|U|56
9ZHC|1|A|G|57
9ZHC|1|A|C|58
*
9ZHC|1|A|G|254
9ZHC|1|A|A|255
9ZHC|1|A|A|256
9ZHC|1|A|A|257
9ZHC|1|A|C|258
*
9ZHC|1|A|G|274
9ZHC|1|A|G|275
9ZHC|1|A|C|276
9ZHC|1|A|A|277
9ZHC|1|A|C|278
*
9ZHC|1|A|G|307
9ZHC|1|A|A|308
9ZHC|1|A|C|309
*
9ZHC|1|A|G|328
9ZHC|1|A|U|329
9ZHC|1|A|A|330
9ZHC|1|A|G|331
9ZHC|1|A|A|332
9ZHC|1|A|U|333
9ZHC|1|A|A|334
9ZHC|1|A|G|335
9ZHC|1|A|A|336
9ZHC|1|A|U|337
9ZHC|1|A|G|338

Current chains

Chain A

RNase P RNA

Nearby chains