J6_9ZHD_001

3D structure

PDB id

9ZHD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 27

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GAC*GUAGAUAGAUG

Length

42 nucleotides

Bulged bases

9ZHD|1|A|U|52, 9ZHD|1|A|A|256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZHD|1|A|C|21
9ZHD|1|A|G|22
9ZHD|1|A|C|23
*
9ZHD|1|A|G|44
9ZHD|1|A|A|45
9ZHD|1|A|G|46
9ZHD|1|A|G|47
9ZHD|1|A|A|48
9ZHD|1|A|A|49
9ZHD|1|A|A|50
9ZHD|1|A|G|51
9ZHD|1|A|U|52
9ZHD|1|A|C|53
9ZHD|1|A|C|54
9ZHD|1|A|A|55
9ZHD|1|A|U|56
9ZHD|1|A|G|57
9ZHD|1|A|C|58
*
9ZHD|1|A|G|254
9ZHD|1|A|A|255
9ZHD|1|A|A|256
9ZHD|1|A|A|257
9ZHD|1|A|C|258
*
9ZHD|1|A|G|274
9ZHD|1|A|G|275
9ZHD|1|A|C|276
9ZHD|1|A|A|277
9ZHD|1|A|C|278
*
9ZHD|1|A|G|307
9ZHD|1|A|A|308
9ZHD|1|A|C|309
*
9ZHD|1|A|G|328
9ZHD|1|A|U|329
9ZHD|1|A|A|330
9ZHD|1|A|G|331
9ZHD|1|A|A|332
9ZHD|1|A|U|333
9ZHD|1|A|A|334
9ZHD|1|A|G|335
9ZHD|1|A|A|336
9ZHD|1|A|U|337
9ZHD|1|A|G|338

Current chains

Chain A

RNase P RNA

Nearby chains