J6_9ZHF_001

3D structure

PDB id

9ZHF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 29

Experimental method

ELECTRON MICROSCOPY

Resolution

2.88 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GAC*GUAGAUAGAUG

Length

42 nucleotides

Bulged bases

9ZHF|1|A|U|52, 9ZHF|1|A|A|256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZHF|1|A|C|21
9ZHF|1|A|G|22
9ZHF|1|A|C|23
*
9ZHF|1|A|G|44
9ZHF|1|A|A|45
9ZHF|1|A|G|46
9ZHF|1|A|G|47
9ZHF|1|A|A|48
9ZHF|1|A|A|49
9ZHF|1|A|A|50
9ZHF|1|A|G|51
9ZHF|1|A|U|52
9ZHF|1|A|C|53
9ZHF|1|A|C|54
9ZHF|1|A|A|55
9ZHF|1|A|U|56
9ZHF|1|A|G|57
9ZHF|1|A|C|58
*
9ZHF|1|A|G|254
9ZHF|1|A|A|255
9ZHF|1|A|A|256
9ZHF|1|A|A|257
9ZHF|1|A|C|258
*
9ZHF|1|A|G|274
9ZHF|1|A|G|275
9ZHF|1|A|C|276
9ZHF|1|A|A|277
9ZHF|1|A|C|278
*
9ZHF|1|A|G|307
9ZHF|1|A|A|308
9ZHF|1|A|C|309
*
9ZHF|1|A|G|328
9ZHF|1|A|U|329
9ZHF|1|A|A|330
9ZHF|1|A|G|331
9ZHF|1|A|A|332
9ZHF|1|A|U|333
9ZHF|1|A|A|334
9ZHF|1|A|G|335
9ZHF|1|A|A|336
9ZHF|1|A|U|337
9ZHF|1|A|G|338

Current chains

Chain A

RNase P RNA

Nearby chains