J6_9ZHI_001

3D structure

PDB id

9ZHI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 31

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GAC*GUAGAUAGAUG

Length

42 nucleotides

Bulged bases

9ZHI|1|A|U|52, 9ZHI|1|A|A|256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZHI|1|A|C|21
9ZHI|1|A|G|22
9ZHI|1|A|C|23
*
9ZHI|1|A|G|44
9ZHI|1|A|A|45
9ZHI|1|A|G|46
9ZHI|1|A|G|47
9ZHI|1|A|A|48
9ZHI|1|A|A|49
9ZHI|1|A|A|50
9ZHI|1|A|G|51
9ZHI|1|A|U|52
9ZHI|1|A|C|53
9ZHI|1|A|C|54
9ZHI|1|A|A|55
9ZHI|1|A|U|56
9ZHI|1|A|G|57
9ZHI|1|A|C|58
*
9ZHI|1|A|G|254
9ZHI|1|A|A|255
9ZHI|1|A|A|256
9ZHI|1|A|A|257
9ZHI|1|A|C|258
*
9ZHI|1|A|G|274
9ZHI|1|A|G|275
9ZHI|1|A|C|276
9ZHI|1|A|A|277
9ZHI|1|A|C|278
*
9ZHI|1|A|G|307
9ZHI|1|A|A|308
9ZHI|1|A|C|309
*
9ZHI|1|A|G|328
9ZHI|1|A|U|329
9ZHI|1|A|A|330
9ZHI|1|A|G|331
9ZHI|1|A|A|332
9ZHI|1|A|U|333
9ZHI|1|A|A|334
9ZHI|1|A|G|335
9ZHI|1|A|A|336
9ZHI|1|A|U|337
9ZHI|1|A|G|338

Current chains

Chain A

RNase P RNA

Nearby chains