J6_9ZHJ_001

3D structure

PDB id

9ZHJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 32

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GAC*GUAGAUAGAUG

Length

42 nucleotides

Bulged bases

9ZHJ|1|A|U|52, 9ZHJ|1|A|A|256, 9ZHJ|1|A|A|334

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZHJ|1|A|C|21
9ZHJ|1|A|G|22
9ZHJ|1|A|C|23
*
9ZHJ|1|A|G|44
9ZHJ|1|A|A|45
9ZHJ|1|A|G|46
9ZHJ|1|A|G|47
9ZHJ|1|A|A|48
9ZHJ|1|A|A|49
9ZHJ|1|A|A|50
9ZHJ|1|A|G|51
9ZHJ|1|A|U|52
9ZHJ|1|A|C|53
9ZHJ|1|A|C|54
9ZHJ|1|A|A|55
9ZHJ|1|A|U|56
9ZHJ|1|A|G|57
9ZHJ|1|A|C|58
*
9ZHJ|1|A|G|254
9ZHJ|1|A|A|255
9ZHJ|1|A|A|256
9ZHJ|1|A|A|257
9ZHJ|1|A|C|258
*
9ZHJ|1|A|G|274
9ZHJ|1|A|G|275
9ZHJ|1|A|C|276
9ZHJ|1|A|A|277
9ZHJ|1|A|C|278
*
9ZHJ|1|A|G|307
9ZHJ|1|A|A|308
9ZHJ|1|A|C|309
*
9ZHJ|1|A|G|328
9ZHJ|1|A|U|329
9ZHJ|1|A|A|330
9ZHJ|1|A|G|331
9ZHJ|1|A|A|332
9ZHJ|1|A|U|333
9ZHJ|1|A|A|334
9ZHJ|1|A|G|335
9ZHJ|1|A|A|336
9ZHJ|1|A|U|337
9ZHJ|1|A|G|338

Current chains

Chain A

RNase P RNA

Nearby chains