J6_9ZHT_001

3D structure

PDB id

9ZHT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 39

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GAC*GUAGAUAGAUG

Length

42 nucleotides

Bulged bases

9ZHT|1|A|U|52, 9ZHT|1|A|A|256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZHT|1|A|C|21
9ZHT|1|A|G|22
9ZHT|1|A|C|23
*
9ZHT|1|A|G|44
9ZHT|1|A|A|45
9ZHT|1|A|G|46
9ZHT|1|A|G|47
9ZHT|1|A|A|48
9ZHT|1|A|A|49
9ZHT|1|A|A|50
9ZHT|1|A|G|51
9ZHT|1|A|U|52
9ZHT|1|A|C|53
9ZHT|1|A|C|54
9ZHT|1|A|A|55
9ZHT|1|A|U|56
9ZHT|1|A|G|57
9ZHT|1|A|C|58
*
9ZHT|1|A|G|254
9ZHT|1|A|A|255
9ZHT|1|A|A|256
9ZHT|1|A|A|257
9ZHT|1|A|C|258
*
9ZHT|1|A|G|274
9ZHT|1|A|G|275
9ZHT|1|A|C|276
9ZHT|1|A|A|277
9ZHT|1|A|C|278
*
9ZHT|1|A|G|307
9ZHT|1|A|A|308
9ZHT|1|A|C|309
*
9ZHT|1|A|G|328
9ZHT|1|A|U|329
9ZHT|1|A|A|330
9ZHT|1|A|G|331
9ZHT|1|A|A|332
9ZHT|1|A|U|333
9ZHT|1|A|A|334
9ZHT|1|A|G|335
9ZHT|1|A|A|336
9ZHT|1|A|U|337
9ZHT|1|A|G|338

Current chains

Chain A

RNase P RNA

Nearby chains