J6_9ZHU_001

3D structure

PDB id

9ZHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 40

Experimental method

ELECTRON MICROSCOPY

Resolution

3.07 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GAC*GUAGAUAGAUG

Length

42 nucleotides

Bulged bases

9ZHU|1|A|U|52, 9ZHU|1|A|A|256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZHU|1|A|C|21
9ZHU|1|A|G|22
9ZHU|1|A|C|23
*
9ZHU|1|A|G|44
9ZHU|1|A|A|45
9ZHU|1|A|G|46
9ZHU|1|A|G|47
9ZHU|1|A|A|48
9ZHU|1|A|A|49
9ZHU|1|A|A|50
9ZHU|1|A|G|51
9ZHU|1|A|U|52
9ZHU|1|A|C|53
9ZHU|1|A|C|54
9ZHU|1|A|A|55
9ZHU|1|A|U|56
9ZHU|1|A|G|57
9ZHU|1|A|C|58
*
9ZHU|1|A|G|254
9ZHU|1|A|A|255
9ZHU|1|A|A|256
9ZHU|1|A|A|257
9ZHU|1|A|C|258
*
9ZHU|1|A|G|274
9ZHU|1|A|G|275
9ZHU|1|A|C|276
9ZHU|1|A|A|277
9ZHU|1|A|C|278
*
9ZHU|1|A|G|307
9ZHU|1|A|A|308
9ZHU|1|A|C|309
*
9ZHU|1|A|G|328
9ZHU|1|A|U|329
9ZHU|1|A|A|330
9ZHU|1|A|G|331
9ZHU|1|A|A|332
9ZHU|1|A|U|333
9ZHU|1|A|A|334
9ZHU|1|A|G|335
9ZHU|1|A|A|336
9ZHU|1|A|U|337
9ZHU|1|A|G|338

Current chains

Chain A

RNase P RNA

Nearby chains