J6_9ZI2_001

3D structure

PDB id

9ZI2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 45

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GAC*GUAGAUAGAUG

Length

42 nucleotides

Bulged bases

9ZI2|1|A|U|52, 9ZI2|1|A|A|256, 9ZI2|1|A|A|334

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZI2|1|A|C|21
9ZI2|1|A|G|22
9ZI2|1|A|C|23
*
9ZI2|1|A|G|44
9ZI2|1|A|A|45
9ZI2|1|A|G|46
9ZI2|1|A|G|47
9ZI2|1|A|A|48
9ZI2|1|A|A|49
9ZI2|1|A|A|50
9ZI2|1|A|G|51
9ZI2|1|A|U|52
9ZI2|1|A|C|53
9ZI2|1|A|C|54
9ZI2|1|A|A|55
9ZI2|1|A|U|56
9ZI2|1|A|G|57
9ZI2|1|A|C|58
*
9ZI2|1|A|G|254
9ZI2|1|A|A|255
9ZI2|1|A|A|256
9ZI2|1|A|A|257
9ZI2|1|A|C|258
*
9ZI2|1|A|G|274
9ZI2|1|A|G|275
9ZI2|1|A|C|276
9ZI2|1|A|A|277
9ZI2|1|A|C|278
*
9ZI2|1|A|G|307
9ZI2|1|A|A|308
9ZI2|1|A|C|309
*
9ZI2|1|A|G|328
9ZI2|1|A|U|329
9ZI2|1|A|A|330
9ZI2|1|A|G|331
9ZI2|1|A|A|332
9ZI2|1|A|U|333
9ZI2|1|A|A|334
9ZI2|1|A|G|335
9ZI2|1|A|A|336
9ZI2|1|A|U|337
9ZI2|1|A|G|338

Current chains

Chain A

RNase P RNA

Nearby chains