J6_9ZI3_001

3D structure

PDB id

9ZI3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 46

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GAC*GUAGAUAGAUG

Length

42 nucleotides

Bulged bases

9ZI3|1|A|U|52, 9ZI3|1|A|A|256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZI3|1|A|C|21
9ZI3|1|A|G|22
9ZI3|1|A|C|23
*
9ZI3|1|A|G|44
9ZI3|1|A|A|45
9ZI3|1|A|G|46
9ZI3|1|A|G|47
9ZI3|1|A|A|48
9ZI3|1|A|A|49
9ZI3|1|A|A|50
9ZI3|1|A|G|51
9ZI3|1|A|U|52
9ZI3|1|A|C|53
9ZI3|1|A|C|54
9ZI3|1|A|A|55
9ZI3|1|A|U|56
9ZI3|1|A|G|57
9ZI3|1|A|C|58
*
9ZI3|1|A|G|254
9ZI3|1|A|A|255
9ZI3|1|A|A|256
9ZI3|1|A|A|257
9ZI3|1|A|C|258
*
9ZI3|1|A|G|274
9ZI3|1|A|G|275
9ZI3|1|A|C|276
9ZI3|1|A|A|277
9ZI3|1|A|C|278
*
9ZI3|1|A|G|307
9ZI3|1|A|A|308
9ZI3|1|A|C|309
*
9ZI3|1|A|G|328
9ZI3|1|A|U|329
9ZI3|1|A|A|330
9ZI3|1|A|G|331
9ZI3|1|A|A|332
9ZI3|1|A|U|333
9ZI3|1|A|A|334
9ZI3|1|A|G|335
9ZI3|1|A|A|336
9ZI3|1|A|U|337
9ZI3|1|A|G|338

Current chains

Chain A

RNase P RNA

Nearby chains