J6_9ZI4_001

3D structure

PDB id

9ZI4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 53

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GA*UAGAUAGAUG

Length

40 nucleotides

Bulged bases

9ZI4|1|A|U|52, 9ZI4|1|A|A|256, 9ZI4|1|A|A|334, 9ZI4|1|A|G|335

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZI4|1|A|C|21
9ZI4|1|A|G|22
9ZI4|1|A|C|23
*
9ZI4|1|A|G|44
9ZI4|1|A|A|45
9ZI4|1|A|G|46
9ZI4|1|A|G|47
9ZI4|1|A|A|48
9ZI4|1|A|A|49
9ZI4|1|A|A|50
9ZI4|1|A|G|51
9ZI4|1|A|U|52
9ZI4|1|A|C|53
9ZI4|1|A|C|54
9ZI4|1|A|A|55
9ZI4|1|A|U|56
9ZI4|1|A|G|57
9ZI4|1|A|C|58
*
9ZI4|1|A|G|254
9ZI4|1|A|A|255
9ZI4|1|A|A|256
9ZI4|1|A|A|257
9ZI4|1|A|C|258
*
9ZI4|1|A|G|274
9ZI4|1|A|G|275
9ZI4|1|A|C|276
9ZI4|1|A|A|277
9ZI4|1|A|C|278
*
9ZI4|1|A|G|307
9ZI4|1|A|A|308
*
9ZI4|1|A|U|329
9ZI4|1|A|A|330
9ZI4|1|A|G|331
9ZI4|1|A|A|332
9ZI4|1|A|U|333
9ZI4|1|A|A|334
9ZI4|1|A|G|335
9ZI4|1|A|A|336
9ZI4|1|A|U|337
9ZI4|1|A|G|338

Current chains

Chain A

RNase P RNA

Nearby chains