J6_9ZI5_001

3D structure

PDB id

9ZI5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 47

Experimental method

ELECTRON MICROSCOPY

Resolution

2.96 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GAC*GUAGAUAGAUG

Length

42 nucleotides

Bulged bases

9ZI5|1|A|U|52, 9ZI5|1|A|A|256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZI5|1|A|C|21
9ZI5|1|A|G|22
9ZI5|1|A|C|23
*
9ZI5|1|A|G|44
9ZI5|1|A|A|45
9ZI5|1|A|G|46
9ZI5|1|A|G|47
9ZI5|1|A|A|48
9ZI5|1|A|A|49
9ZI5|1|A|A|50
9ZI5|1|A|G|51
9ZI5|1|A|U|52
9ZI5|1|A|C|53
9ZI5|1|A|C|54
9ZI5|1|A|A|55
9ZI5|1|A|U|56
9ZI5|1|A|G|57
9ZI5|1|A|C|58
*
9ZI5|1|A|G|254
9ZI5|1|A|A|255
9ZI5|1|A|A|256
9ZI5|1|A|A|257
9ZI5|1|A|C|258
*
9ZI5|1|A|G|274
9ZI5|1|A|G|275
9ZI5|1|A|C|276
9ZI5|1|A|A|277
9ZI5|1|A|C|278
*
9ZI5|1|A|G|307
9ZI5|1|A|A|308
9ZI5|1|A|C|309
*
9ZI5|1|A|G|328
9ZI5|1|A|U|329
9ZI5|1|A|A|330
9ZI5|1|A|G|331
9ZI5|1|A|A|332
9ZI5|1|A|U|333
9ZI5|1|A|A|334
9ZI5|1|A|G|335
9ZI5|1|A|A|336
9ZI5|1|A|U|337
9ZI5|1|A|G|338

Current chains

Chain A

RNase P RNA

Nearby chains