J6_9ZI6_001

3D structure

PDB id

9ZI6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 52

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GA*UAGAUAGAUG

Length

40 nucleotides

Bulged bases

9ZI6|1|A|U|52, 9ZI6|1|A|A|256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZI6|1|A|C|21
9ZI6|1|A|G|22
9ZI6|1|A|C|23
*
9ZI6|1|A|G|44
9ZI6|1|A|A|45
9ZI6|1|A|G|46
9ZI6|1|A|G|47
9ZI6|1|A|A|48
9ZI6|1|A|A|49
9ZI6|1|A|A|50
9ZI6|1|A|G|51
9ZI6|1|A|U|52
9ZI6|1|A|C|53
9ZI6|1|A|C|54
9ZI6|1|A|A|55
9ZI6|1|A|U|56
9ZI6|1|A|G|57
9ZI6|1|A|C|58
*
9ZI6|1|A|G|254
9ZI6|1|A|A|255
9ZI6|1|A|A|256
9ZI6|1|A|A|257
9ZI6|1|A|C|258
*
9ZI6|1|A|G|274
9ZI6|1|A|G|275
9ZI6|1|A|C|276
9ZI6|1|A|A|277
9ZI6|1|A|C|278
*
9ZI6|1|A|G|307
9ZI6|1|A|A|308
*
9ZI6|1|A|U|329
9ZI6|1|A|A|330
9ZI6|1|A|G|331
9ZI6|1|A|A|332
9ZI6|1|A|U|333
9ZI6|1|A|A|334
9ZI6|1|A|G|335
9ZI6|1|A|A|336
9ZI6|1|A|U|337
9ZI6|1|A|G|338

Current chains

Chain A

RNase P RNA

Nearby chains