J6_9ZIE_001

3D structure

PDB id

9ZIE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 6

Experimental method

ELECTRON MICROSCOPY

Resolution

3.16 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GA*UAGAUAGAUG

Length

40 nucleotides

Bulged bases

9ZIE|1|A|U|52, 9ZIE|1|A|A|256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZIE|1|A|C|21
9ZIE|1|A|G|22
9ZIE|1|A|C|23
*
9ZIE|1|A|G|44
9ZIE|1|A|A|45
9ZIE|1|A|G|46
9ZIE|1|A|G|47
9ZIE|1|A|A|48
9ZIE|1|A|A|49
9ZIE|1|A|A|50
9ZIE|1|A|G|51
9ZIE|1|A|U|52
9ZIE|1|A|C|53
9ZIE|1|A|C|54
9ZIE|1|A|A|55
9ZIE|1|A|U|56
9ZIE|1|A|G|57
9ZIE|1|A|C|58
*
9ZIE|1|A|G|254
9ZIE|1|A|A|255
9ZIE|1|A|A|256
9ZIE|1|A|A|257
9ZIE|1|A|C|258
*
9ZIE|1|A|G|274
9ZIE|1|A|G|275
9ZIE|1|A|C|276
9ZIE|1|A|A|277
9ZIE|1|A|C|278
*
9ZIE|1|A|G|307
9ZIE|1|A|A|308
*
9ZIE|1|A|U|329
9ZIE|1|A|A|330
9ZIE|1|A|G|331
9ZIE|1|A|A|332
9ZIE|1|A|U|333
9ZIE|1|A|A|334
9ZIE|1|A|G|335
9ZIE|1|A|A|336
9ZIE|1|A|U|337
9ZIE|1|A|G|338

Current chains

Chain A

RNase P RNA (417-MER)

Nearby chains

Chain B

Ribonuclease P protein component