J6_9ZIG_001

3D structure

PDB id

9ZIG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 8

Experimental method

ELECTRON MICROSCOPY

Resolution

3.44 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GA*UAGAUAGAUG

Length

40 nucleotides

Bulged bases

9ZIG|1|A|U|52, 9ZIG|1|A|A|256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZIG|1|A|C|21
9ZIG|1|A|G|22
9ZIG|1|A|C|23
*
9ZIG|1|A|G|44
9ZIG|1|A|A|45
9ZIG|1|A|G|46
9ZIG|1|A|G|47
9ZIG|1|A|A|48
9ZIG|1|A|A|49
9ZIG|1|A|A|50
9ZIG|1|A|G|51
9ZIG|1|A|U|52
9ZIG|1|A|C|53
9ZIG|1|A|C|54
9ZIG|1|A|A|55
9ZIG|1|A|U|56
9ZIG|1|A|G|57
9ZIG|1|A|C|58
*
9ZIG|1|A|G|254
9ZIG|1|A|A|255
9ZIG|1|A|A|256
9ZIG|1|A|A|257
9ZIG|1|A|C|258
*
9ZIG|1|A|G|274
9ZIG|1|A|G|275
9ZIG|1|A|C|276
9ZIG|1|A|A|277
9ZIG|1|A|C|278
*
9ZIG|1|A|G|307
9ZIG|1|A|A|308
*
9ZIG|1|A|U|329
9ZIG|1|A|A|330
9ZIG|1|A|G|331
9ZIG|1|A|A|332
9ZIG|1|A|U|333
9ZIG|1|A|A|334
9ZIG|1|A|G|335
9ZIG|1|A|A|336
9ZIG|1|A|U|337
9ZIG|1|A|G|338

Current chains

Chain A

RNase P RNA (417-MER)

Nearby chains

Chain B

Ribonuclease P protein component