J6_9ZIN_001

3D structure

PDB id

9ZIN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 15

Experimental method

ELECTRON MICROSCOPY

Resolution

3.25 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GA*UAGAUAGAUG

Length

40 nucleotides

Bulged bases

9ZIN|1|A|U|52, 9ZIN|1|A|A|256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZIN|1|A|C|21
9ZIN|1|A|G|22
9ZIN|1|A|C|23
*
9ZIN|1|A|G|44
9ZIN|1|A|A|45
9ZIN|1|A|G|46
9ZIN|1|A|G|47
9ZIN|1|A|A|48
9ZIN|1|A|A|49
9ZIN|1|A|A|50
9ZIN|1|A|G|51
9ZIN|1|A|U|52
9ZIN|1|A|C|53
9ZIN|1|A|C|54
9ZIN|1|A|A|55
9ZIN|1|A|U|56
9ZIN|1|A|G|57
9ZIN|1|A|C|58
*
9ZIN|1|A|G|254
9ZIN|1|A|A|255
9ZIN|1|A|A|256
9ZIN|1|A|A|257
9ZIN|1|A|C|258
*
9ZIN|1|A|G|274
9ZIN|1|A|G|275
9ZIN|1|A|C|276
9ZIN|1|A|A|277
9ZIN|1|A|C|278
*
9ZIN|1|A|G|307
9ZIN|1|A|A|308
*
9ZIN|1|A|U|329
9ZIN|1|A|A|330
9ZIN|1|A|G|331
9ZIN|1|A|A|332
9ZIN|1|A|U|333
9ZIN|1|A|A|334
9ZIN|1|A|G|335
9ZIN|1|A|A|336
9ZIN|1|A|U|337
9ZIN|1|A|G|338

Current chains

Chain A

RNase P RNA (417-MER)

Nearby chains

Chain B

Ribonuclease P protein component