J6_9ZIU_001

3D structure

PDB id

9ZIU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 16

Experimental method

ELECTRON MICROSCOPY

Resolution

3.45 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GA*UAGAUAGAUG

Length

40 nucleotides

Bulged bases

9ZIU|1|A|U|52, 9ZIU|1|A|A|256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZIU|1|A|C|21
9ZIU|1|A|G|22
9ZIU|1|A|C|23
*
9ZIU|1|A|G|44
9ZIU|1|A|A|45
9ZIU|1|A|G|46
9ZIU|1|A|G|47
9ZIU|1|A|A|48
9ZIU|1|A|A|49
9ZIU|1|A|A|50
9ZIU|1|A|G|51
9ZIU|1|A|U|52
9ZIU|1|A|C|53
9ZIU|1|A|C|54
9ZIU|1|A|A|55
9ZIU|1|A|U|56
9ZIU|1|A|G|57
9ZIU|1|A|C|58
*
9ZIU|1|A|G|254
9ZIU|1|A|A|255
9ZIU|1|A|A|256
9ZIU|1|A|A|257
9ZIU|1|A|C|258
*
9ZIU|1|A|G|274
9ZIU|1|A|G|275
9ZIU|1|A|C|276
9ZIU|1|A|A|277
9ZIU|1|A|C|278
*
9ZIU|1|A|G|307
9ZIU|1|A|A|308
*
9ZIU|1|A|U|329
9ZIU|1|A|A|330
9ZIU|1|A|G|331
9ZIU|1|A|A|332
9ZIU|1|A|U|333
9ZIU|1|A|A|334
9ZIU|1|A|G|335
9ZIU|1|A|A|336
9ZIU|1|A|U|337
9ZIU|1|A|G|338

Current chains

Chain A

RNase P RNA (417-MER)

Nearby chains

Chain B

Ribonuclease P protein component