J6_9ZIZ_001

3D structure

PDB id

9ZIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 19

Experimental method

ELECTRON MICROSCOPY

Resolution

3.24 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GA*UAGAUAGAUG

Length

40 nucleotides

Bulged bases

9ZIZ|1|A|U|52, 9ZIZ|1|A|A|256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZIZ|1|A|C|21
9ZIZ|1|A|G|22
9ZIZ|1|A|C|23
*
9ZIZ|1|A|G|44
9ZIZ|1|A|A|45
9ZIZ|1|A|G|46
9ZIZ|1|A|G|47
9ZIZ|1|A|A|48
9ZIZ|1|A|A|49
9ZIZ|1|A|A|50
9ZIZ|1|A|G|51
9ZIZ|1|A|U|52
9ZIZ|1|A|C|53
9ZIZ|1|A|C|54
9ZIZ|1|A|A|55
9ZIZ|1|A|U|56
9ZIZ|1|A|G|57
9ZIZ|1|A|C|58
*
9ZIZ|1|A|G|254
9ZIZ|1|A|A|255
9ZIZ|1|A|A|256
9ZIZ|1|A|A|257
9ZIZ|1|A|C|258
*
9ZIZ|1|A|G|274
9ZIZ|1|A|G|275
9ZIZ|1|A|C|276
9ZIZ|1|A|A|277
9ZIZ|1|A|C|278
*
9ZIZ|1|A|G|307
9ZIZ|1|A|A|308
*
9ZIZ|1|A|U|329
9ZIZ|1|A|A|330
9ZIZ|1|A|G|331
9ZIZ|1|A|A|332
9ZIZ|1|A|U|333
9ZIZ|1|A|A|334
9ZIZ|1|A|G|335
9ZIZ|1|A|A|336
9ZIZ|1|A|U|337
9ZIZ|1|A|G|338

Current chains

Chain A

RNase P RNA (417-MER)

Nearby chains

Chain B

Ribonuclease P protein component