J6_9ZN2_001

3D structure

PDB id

9ZN2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli 70S ribosome initiation complex bound to IF1 and extended IF2-GDPCP (70S IC*)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

9ZN2|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZN2|1|A|G|45
9ZN2|1|A|G|46
*
9ZN2|1|A|C|179
9ZN2|1|A|G|180
9ZN2|1|A|A|181
9ZN2|1|A|A|182
9ZN2|1|A|C|183
*
9ZN2|1|A|G|214
9ZN2|1|A|G|215
9ZN2|1|A|A|216
9ZN2|1|A|A|217
9ZN2|1|A|A|218
9ZN2|1|A|A|219
9ZN2|1|A|G|220
9ZN2|1|A|A|221
9ZN2|1|A|A|222
9ZN2|1|A|A|223
9ZN2|1|A|U|224
*
9ZN2|1|A|A|231
9ZN2|1|A|G|232
9ZN2|1|A|A|233
9ZN2|1|A|U|234
9ZN2|1|A|U|235
*
9ZN2|1|A|A|262
9ZN2|1|A|G|263
9ZN2|1|A|C|264
9ZN2|1|A|A|265
9ZN2|1|A|G|266
*
9ZN2|1|A|C|426
9ZN2|1|A|U|427
9ZN2|1|A|A|428
9ZN2|1|A|A|429
9ZN2|1|A|A|430
9ZN2|1|A|U|431
9ZN2|1|A|A|432
9ZN2|1|A|C|433

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain 6

50S ribosomal protein L34