3D structure

PDB id
9ZTL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Single Particle Cryo EM Analysis of a Ribosome Nascent Globin Complex
Experimental method
ELECTRON MICROSCOPY
Resolution
2.91 Å

Loop

Sequence
GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC
Length
36 nucleotides
Bulged bases
9ZTL|1|a|A|223, 9ZTL|1|a|U|431
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9ZTL|1|a|G|45
9ZTL|1|a|G|46
*
9ZTL|1|a|C|179
9ZTL|1|a|G|180
9ZTL|1|a|A|181
9ZTL|1|a|A|182
9ZTL|1|a|C|183
*
9ZTL|1|a|G|214
9ZTL|1|a|G|215
9ZTL|1|a|A|216
9ZTL|1|a|A|217
9ZTL|1|a|A|218
9ZTL|1|a|A|219
9ZTL|1|a|G|220
9ZTL|1|a|A|221
9ZTL|1|a|A|222
9ZTL|1|a|A|223
9ZTL|1|a|U|224
*
9ZTL|1|a|A|231
9ZTL|1|a|G|232
9ZTL|1|a|A|233
9ZTL|1|a|U|234
9ZTL|1|a|U|235
*
9ZTL|1|a|A|262
9ZTL|1|a|G|263
9ZTL|1|a|C|264
9ZTL|1|a|A|265
9ZTL|1|a|G|266
*
9ZTL|1|a|C|426
9ZTL|1|a|U|427
9ZTL|1|a|A|428
9ZTL|1|a|A|429
9ZTL|1|a|A|430
9ZTL|1|a|U|431
9ZTL|1|a|A|432
9ZTL|1|a|C|433

Current chains

Chain a
23s rRNA

Nearby chains

Chain 1
50S ribosomal protein L34

Coloring options:

Copyright 2026 BGSU RNA group. Page generated in 0.558 s