J7_11EL_001
3D structure
- PDB id
- 11EL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Vibrio cholerae (VC-ST)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
- Length
- 35 nucleotides
- Bulged bases
- 11EL|1|a|C|2021
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
11EL|1|a|C|8
11EL|1|a|G|9
11EL|1|a|A|10
11EL|1|a|C|11
11EL|1|a|U|12
11EL|1|a|A|13
11EL|1|a|A|14
11EL|1|a|G|15
*
11EL|1|a|U|525
11EL|1|a|A|526
11EL|1|a|C|527
11EL|1|a|A|528
11EL|1|a|A|529
11EL|1|a|G|530
11EL|1|a|C|531
*
11EL|1|a|G|2018
11EL|1|a|A|2019
11EL|1|a|A|2020
11EL|1|a|C|2021
11EL|1|a|U|2022
11EL|1|a|C|2023
*
11EL|1|a|G|2040
11EL|1|a|U|2041
11EL|1|a|A|2042
11EL|1|a|C|2043
*
11EL|1|a|G|2625
11EL|1|a|C|2626
11EL|1|a|G|2627
11EL|1|a|C|2628
11EL|1|a|U|2629
11EL|1|a|G|2630
*
11EL|1|a|C|2788
11EL|1|a|C|2789
*
11EL|1|a|G|2894
11EL|1|a|G|2895
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain d
- 50S ribosomal protein L3
- Chain i
- Large ribosomal subunit protein uL13
- Chain p
- 50S ribosomal protein L20
- Chain r
- Large ribosomal subunit protein uL22
- Chain z
- 50S ribosomal protein L32
Coloring options: