J7_11FV_001
3D structure
- PDB id
- 11FV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-S3.3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GCGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GGCU
- Length
- 38 nucleotides
- Bulged bases
- 11FV|1|I|C|2021
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
11FV|1|I|G|7
11FV|1|I|C|8
11FV|1|I|G|9
11FV|1|I|A|10
11FV|1|I|C|11
11FV|1|I|U|12
11FV|1|I|A|13
11FV|1|I|A|14
11FV|1|I|G|15
*
11FV|1|I|U|525
11FV|1|I|A|526
11FV|1|I|C|527
11FV|1|I|A|528
11FV|1|I|A|529
11FV|1|I|G|530
11FV|1|I|C|531
*
11FV|1|I|G|2018
11FV|1|I|A|2019
11FV|1|I|A|2020
11FV|1|I|C|2021
11FV|1|I|U|2022
11FV|1|I|C|2023
*
11FV|1|I|G|2040
11FV|1|I|U|2041
11FV|1|I|A|2042
11FV|1|I|C|2043
*
11FV|1|I|G|2625
11FV|1|I|C|2626
11FV|1|I|G|2627
11FV|1|I|C|2628
11FV|1|I|U|2629
11FV|1|I|G|2630
*
11FV|1|I|C|2788
11FV|1|I|C|2789
*
11FV|1|I|G|2894
11FV|1|I|G|2895
11FV|1|I|C|2896
11FV|1|I|U|2897
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain 0
- Large ribosomal subunit protein uL22
- Chain L
- Large ribosomal subunit protein uL3
- Chain R
- Large ribosomal subunit protein uL13
- Chain Y
- 50S ribosomal protein L20
- Chain i
- 50S ribosomal protein L32
Coloring options: