3D structure

PDB id
1K73 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Co-crystal Structure of Anisomycin Bound to the 50S Ribosomal Subunit
Experimental method
X-RAY DIFFRACTION
Resolution
3.01 Å

Loop

Sequence
CGAAAC*GACC*GAUUCCG*CAGGAG*CAGAG*CC*GAGUAG
Length
36 nucleotides
Bulged bases
1K73|1|A|C|1044
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

1K73|1|A|C|910
1K73|1|A|G|911
1K73|1|A|A|912
1K73|1|A|A|913
1K73|1|A|A|914
1K73|1|A|C|915
*
1K73|1|A|G|928
1K73|1|A|A|929
1K73|1|A|C|930
1K73|1|A|C|931
*
1K73|1|A|G|1039
1K73|1|A|A|1040
1K73|1|A|U|1041
1K73|1|A|U|1042
1K73|1|A|C|1043
1K73|1|A|C|1044
1K73|1|A|G|1045
*
1K73|1|A|C|1069
1K73|1|A|A|1070
1K73|1|A|G|1071
1K73|1|A|G|1072
1K73|1|A|A|1073
1K73|1|A|G|1074
*
1K73|1|A|C|1085
1K73|1|A|A|1086
1K73|1|A|G|1087
1K73|1|A|A|1088
1K73|1|A|G|1089
*
1K73|1|A|C|1267
1K73|1|A|C|1268
*
1K73|1|A|G|1290
1K73|1|A|A|1291
1K73|1|A|G|1292
1K73|1|A|U|1293
1K73|1|A|A|1294
1K73|1|A|G|1295

Current chains

Chain A
23S RRNA

Nearby chains

Chain B
5S ribosomal RNA; 5S rRNA
Chain M
RIBOSOMAL PROTEIN L15
Chain R
RIBOSOMAL PROTEIN L21E
Chain X
RIBOSOMAL PROTEIN L30
Chain Z
RIBOSOMAL PROTEIN L32E

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.205 s