J7_1VVJ_002
3D structure
- PDB id
- 1VVJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.44 Å
Loop
- Sequence
- AUGGUAAG*UACAAGC*GAACUG*CUAC*GCGCAG*CC*GU
- Length
- 35 nucleotides
- Bulged bases
- 1VVJ|1|YA|C|2021
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
1VVJ|1|YA|A|8
1VVJ|1|YA|U|9
1VVJ|1|YA|G|10
1VVJ|1|YA|G|11
1VVJ|1|YA|U|12
1VVJ|1|YA|A|13
1VVJ|1|YA|A|14
1VVJ|1|YA|G|15
*
1VVJ|1|YA|U|525
1VVJ|1|YA|A|526
1VVJ|1|YA|C|527
1VVJ|1|YA|A|528
1VVJ|1|YA|A|529
1VVJ|1|YA|G|530
1VVJ|1|YA|C|531
*
1VVJ|1|YA|G|2018
1VVJ|1|YA|A|2019
1VVJ|1|YA|A|2020
1VVJ|1|YA|C|2021
1VVJ|1|YA|U|2022
1VVJ|1|YA|G|2023
*
1VVJ|1|YA|C|2040
1VVJ|1|YA|U|2041
1VVJ|1|YA|A|2042
1VVJ|1|YA|C|2043
*
1VVJ|1|YA|G|2625
1VVJ|1|YA|C|2626
1VVJ|1|YA|G|2627
1VVJ|1|YA|C|2628
1VVJ|1|YA|A|2629
1VVJ|1|YA|G|2630
*
1VVJ|1|YA|C|2788
1VVJ|1|YA|C|2789
*
1VVJ|1|YA|G|2894
1VVJ|1|YA|U|2895
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain Y5
- 50S ribosomal protein L33
- Chain YE
- 50S ribosomal protein L3
- Chain YN
- 50S ribosomal protein L13
- Chain YU
- 50S ribosomal protein L20
- Chain YW
- 50S ribosomal protein L22
Coloring options: