J7_28UI_001
3D structure
- PDB id
- 28UI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome, trapped conformational excited state of SSU-h44 apical loop, with A- and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.1 Å
Loop
- Sequence
- CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
- Length
- 35 nucleotides
- Bulged bases
- 28UI|1|a|C|2021
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
28UI|1|a|C|8
28UI|1|a|G|9
28UI|1|a|A|10
28UI|1|a|C|11
28UI|1|a|U|12
28UI|1|a|A|13
28UI|1|a|A|14
28UI|1|a|G|15
*
28UI|1|a|U|525
28UI|1|a|A|526
28UI|1|a|C|527
28UI|1|a|A|528
28UI|1|a|A|529
28UI|1|a|G|530
28UI|1|a|C|531
*
28UI|1|a|G|2018
28UI|1|a|A|2019
28UI|1|a|A|2020
28UI|1|a|C|2021
28UI|1|a|U|2022
28UI|1|a|C|2023
*
28UI|1|a|G|2040
28UI|1|a|U|2041
28UI|1|a|A|2042
28UI|1|a|C|2043
*
28UI|1|a|G|2625
28UI|1|a|C|2626
28UI|1|a|G|2627
28UI|1|a|C|2628
28UI|1|a|U|2629
28UI|1|a|G|2630
*
28UI|1|a|C|2788
28UI|1|a|C|2789
*
28UI|1|a|G|2894
28UI|1|a|G|2895
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain d
- Large ribosomal subunit protein uL3
- Chain i
- Large ribosomal subunit protein uL13
- Chain p
- Large ribosomal subunit protein bL20
- Chain r
- Large ribosomal subunit protein uL22
- Chain z
- Large ribosomal subunit protein bL32
Coloring options: