J7_2QA4_001

3D structure

PDB id

2QA4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

A more complete structure of the the L7/L12 stalk of the Haloarcula marismortui 50S large ribosomal subunit

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGAAAC*GACC*GAUUCCG*CAGGAG*CAGAG*CC*GAGUAG

Length

36 nucleotides

Bulged bases

2QA4|1|0|C|1044

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2QA4|1|0|C|910
2QA4|1|0|G|911
2QA4|1|0|A|912
2QA4|1|0|A|913
2QA4|1|0|A|914
2QA4|1|0|C|915
*
2QA4|1|0|G|928
2QA4|1|0|A|929
2QA4|1|0|C|930
2QA4|1|0|C|931
*
2QA4|1|0|G|1039
2QA4|1|0|A|1040
2QA4|1|0|U|1041
2QA4|1|0|U|1042
2QA4|1|0|C|1043
2QA4|1|0|C|1044
2QA4|1|0|G|1045
*
2QA4|1|0|C|1069
2QA4|1|0|A|1070
2QA4|1|0|G|1071
2QA4|1|0|G|1072
2QA4|1|0|A|1073
2QA4|1|0|G|1074
*
2QA4|1|0|C|1085
2QA4|1|0|A|1086
2QA4|1|0|G|1087
2QA4|1|0|A|1088
2QA4|1|0|G|1089
*
2QA4|1|0|C|1267
2QA4|1|0|C|1268
*
2QA4|1|0|G|1290
2QA4|1|0|A|1291
2QA4|1|0|G|1292
2QA4|1|0|U|1293
2QA4|1|0|A|1294
2QA4|1|0|G|1295

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain 9

5S ribosomal RNA; 5S rRNA

Chain L

50S ribosomal protein L15P

Chain W

50S ribosomal protein L30P

Chain Y

50S ribosomal protein L32e