J7_2ZJR_002
3D structure
- PDB id
- 2ZJR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Refined native structure of the large ribosomal subunit (50S) from Deinococcus radiodurans
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.91 Å
Loop
- Sequence
- CGAAAU*AG*UGAG*CGAGAG*CAGAC*GA*UGGUAG
- Length
- 31 nucleotides
- Bulged bases
- 2ZJR|1|X|G|955, 2ZJR|1|X|A|956
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
2ZJR|1|X|C|830
2ZJR|1|X|G|831
2ZJR|1|X|A|832
2ZJR|1|X|A|833
2ZJR|1|X|A|834
2ZJR|1|X|U|835
*
2ZJR|1|X|A|848
2ZJR|1|X|G|849
*
2ZJR|1|X|U|954
2ZJR|1|X|G|955
2ZJR|1|X|A|956
2ZJR|1|X|G|957
*
2ZJR|1|X|C|982
2ZJR|1|X|G|983
2ZJR|1|X|A|984
2ZJR|1|X|G|985
2ZJR|1|X|A|986
2ZJR|1|X|G|987
*
2ZJR|1|X|C|998
2ZJR|1|X|A|999
2ZJR|1|X|G|1000
2ZJR|1|X|A|1001
2ZJR|1|X|C|1002
*
2ZJR|1|X|G|1174
2ZJR|1|X|A|1175
*
2ZJR|1|X|U|1199
2ZJR|1|X|G|1200
2ZJR|1|X|G|1201
2ZJR|1|X|U|1202
2ZJR|1|X|A|1203
2ZJR|1|X|G|1204
Current chains
- Chain X
- ribosomal 23S RNA
Nearby chains
- Chain 3
- 50S ribosomal protein L35
- Chain I
- 50S ribosomal protein L15
- Chain N
- 50S ribosomal protein L20
- Chain O
- 50S ribosomal protein L21
- Chain W
- 50S ribosomal protein L30
- Chain Y
- 5S ribosomal RNA; 5S rRNA
Coloring options: