3D structure

PDB id
3CCQ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488U
Experimental method
X-RAY DIFFRACTION
Resolution
2.9 Å

Loop

Sequence
CGAAAC*GACC*GAUUCCG*CAGGAG*CAGAG*CC*GAGUAG
Length
36 nucleotides
Bulged bases
3CCQ|1|0|C|1044
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3CCQ|1|0|C|910
3CCQ|1|0|G|911
3CCQ|1|0|A|912
3CCQ|1|0|A|913
3CCQ|1|0|A|914
3CCQ|1|0|C|915
*
3CCQ|1|0|G|928
3CCQ|1|0|A|929
3CCQ|1|0|C|930
3CCQ|1|0|C|931
*
3CCQ|1|0|G|1039
3CCQ|1|0|A|1040
3CCQ|1|0|U|1041
3CCQ|1|0|U|1042
3CCQ|1|0|C|1043
3CCQ|1|0|C|1044
3CCQ|1|0|G|1045
*
3CCQ|1|0|C|1069
3CCQ|1|0|A|1070
3CCQ|1|0|G|1071
3CCQ|1|0|G|1072
3CCQ|1|0|A|1073
3CCQ|1|0|G|1074
*
3CCQ|1|0|C|1085
3CCQ|1|0|A|1086
3CCQ|1|0|G|1087
3CCQ|1|0|A|1088
3CCQ|1|0|G|1089
*
3CCQ|1|0|C|1267
3CCQ|1|0|C|1268
*
3CCQ|1|0|G|1290
3CCQ|1|0|A|1291
3CCQ|1|0|G|1292
3CCQ|1|0|U|1293
3CCQ|1|0|A|1294
3CCQ|1|0|G|1295

Current chains

Chain 0
23S RIBOSOMAL RNA

Nearby chains

Chain 9
5S ribosomal RNA; 5S rRNA
Chain L
50S ribosomal protein L15P
Chain W
50S ribosomal protein L30P
Chain Y
50S ribosomal protein L32e

Coloring options:

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