J7_3CCR_001

3D structure

PDB id

3CCR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488C. Density for anisomycin is visible but not included in the model.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGAAAC*GACC*GAUUCCG*CAGGAG*CAGAG*CC*GAGUAG

Length

36 nucleotides

Bulged bases

3CCR|1|0|C|1044

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3CCR|1|0|C|910
3CCR|1|0|G|911
3CCR|1|0|A|912
3CCR|1|0|A|913
3CCR|1|0|A|914
3CCR|1|0|C|915
*
3CCR|1|0|G|928
3CCR|1|0|A|929
3CCR|1|0|C|930
3CCR|1|0|C|931
*
3CCR|1|0|G|1039
3CCR|1|0|A|1040
3CCR|1|0|U|1041
3CCR|1|0|U|1042
3CCR|1|0|C|1043
3CCR|1|0|C|1044
3CCR|1|0|G|1045
*
3CCR|1|0|C|1069
3CCR|1|0|A|1070
3CCR|1|0|G|1071
3CCR|1|0|G|1072
3CCR|1|0|A|1073
3CCR|1|0|G|1074
*
3CCR|1|0|C|1085
3CCR|1|0|A|1086
3CCR|1|0|G|1087
3CCR|1|0|A|1088
3CCR|1|0|G|1089
*
3CCR|1|0|C|1267
3CCR|1|0|C|1268
*
3CCR|1|0|G|1290
3CCR|1|0|A|1291
3CCR|1|0|G|1292
3CCR|1|0|U|1293
3CCR|1|0|A|1294
3CCR|1|0|G|1295

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain 9

5S ribosomal RNA; 5S rRNA

Chain L

50S ribosomal protein L15P

Chain W

50S ribosomal protein L30P

Chain Y

50S ribosomal protein L32e